Blas, lapack or atlas for matrix multiplication in c. The major hardware developments always in uenced new developments in linear algebra libraries. Blislab use blas indicates whether your reference dgemm employs an. As a result, the fortran source api for blaslapack plus assumptions about the fortran compiler result in a c source api for blaslapack. Matrix multiplication on gpu using cuda with cublas. The seemingly simple task is about a matrix multiplication of matrix a with its own transpose. We start with a survey of traditional blas and lapack libraries, both the fortran and c interfaces. Dgemm is a simplified interface to the jlapack routine dgemm. The dgemm routine can perform several calculations. It stores the sum of these two products in matrix c. Subroutine f06yaf, transa, transb, m, n, k, alpha, a, lda, b, ldb, beta, c, ldc. Intel corporation, intel itanium 2 processor reference manual for software development and op. The level 1 blas perform scalar, vector and vectorvector operations, the level 2 blas perform matrixvector operations, and the level 3 blas perform matrixmatrix operations. Because the blas are efficient, portable, and widely available, they are commonly used in the development of high quality linear algebra software, lapack for example.
A tuned opencl blas library iwocl 18, may 1416, 2018, oxford, united kingdom. A straightforward implementation of dgemm is three nested loops, yet a blocking algorithm often has higher performance on a processor with a memory hierarchy because blocking matrixmatrix multiplication exploits more data reuse and achieves higher effective memory. Getting started with atlas, blas and lapack i decided to experiment with atlas automatically tuned linear algebra software because it contains a parallel blas library. Hi guys, im having trouble understanding how this routine works. Sgemm and dgemm compute, in single and double precision, respectively. For example, batch lu factorization has been used in subsurface transport simulation 16, where manychemical and microbiological reactions in aowpath are simulated. This interface converts javastyle 2d rowmajor arrays into the 1d columnmajor linearized arrays expected by the lower level jlapack routines. The place to start for how to call it from c is to look at the documentation for dgemm, which you can find online. Blas library installation packages continued package purpose platform contents blas crossdevel3. For those that dont have access to the intel math kernel library atlas is a good choice for obtaining an automatically optimized blas library. In the 90s new parallel platforms in uenced scalapack developments. Some prebuilt optimized blas libraries are also available from the atlas site.
Introduction to parallel programming for physicists francois. Acm t ransactions on mathematical so war e toms, 141. Pdf effective implementation of dgemm on modern multicore cpu. It is packaged on many enduser linux distributions such as ubuntu, and is thus readily available for users who perform calculations on. It focuses on the support for gpu accelerators, since they are the key to performance on todays heterogeneous supercomputers. For example, you can perform this operation with the transpose or conjugate transpose of a and b. Apart from the pointer array arguments, the cublas interface assumes that all. Using intel math kernel library for matrix multiplication c.
Basic linear algebra subprograms blas is a specification that prescribes a set of lowlevel routines for performing common linear algebra operations such as vector addition, scalar multiplication, dot products, linear combinations, and matrix multiplication. Atlas automatically generates an optimized blas library for his architecture. Each routine can be called from user programs written in fortran with the call statement. Sample output produced by all executables across all. Moreover, there is a c type matching every fortran scalar type used in blas and lapack. Reimplementing the above example with thrust will halve the number of lines of code from the main. Multiplying matrices using dgemmmultiplying matrices using dgemm. To build and run this example, see build matrixmultiply mex function using blas functions pass arguments to fortran functions from fortran programs. For example, if m 1024, then the matrix multiply alone uses 231 flops. On entry, ldc specifies the first dimension of c as declared in the calling sub program. Examples compiling, linking, and running a simple matrix. Let us look at typical representations of all three levels of the blas, daxpy, ddot, dgemv, and dgemm, that perform some basic operations.
The resulting matrices c and d will contain the same elements. We take dgemm as an example to illustrate our insight on fermis performance op. Why does the advanced c mexfile example on using lapack. For sample code references please see the two examples below. One of the oldest and most used matrix multiplication implementation gemm is found in the blas library. While one can always use the native blis api for the same, blis also includes blas and cblas interfaces. Youre probably going to have to rebuild that library as it was truncated when the linker began generating an executable, and then.
See also the intelr mkl reference manual for a description of the c interface to lapack functions. The definition of a complex element is the same as given above, and so the handling of. For example we could avoid completely the need to manually manage memory on the host and device using a thrust vector for storing our data. In addition, the slate library is designed to use batch blas i. Using this interface also allows you to omit offset and leading dimension arguments. They show an application written in c using the cublas library api with two indexing styles example 1. Blas and lapack threadsafe version are based on blas basic linear algebra subprograms and lapack linear algebra package. I would like to ask you a rather beginner blas question. Many scienti c computer applications need highperformance matrix algebra. It is a performance critical kernel in numerical computations including lu factorization, which is a benchmark for ranking supercomputers in the world. C example, massively parallel simd machines, or distributed mem. Openblas a fork of gotoblas is a free opensource alternative to the vendor blas implementations. Then you want to understand how to call fortran routines from c dgemm, like all the standard blas routines has.
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